step_factory_single.hpp

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#ifndef STEP_FACTORY_SINGLE_HPP_
#define STEP_FACTORY_SINGLE_HPP_
#include "vdj_pipe/step/all_single_read_steps.hpp"
#include "vdj_pipe/step/step_variant_single_read.hpp"
#include "vdj_pipe/config.hpp"
#include "vdj_pipe/step/step_factory.hpp"

namespace vdj_pipe{

VDJ_PIPE_DECL step_variant_single create_step_single(
         Vm_access_single const& vma,
         boost::property_tree::ptree const& pt,
         Pipe_environment& pe
);

template<> inline Config_single_reads::processing_step
create_step<Config_single_reads>(
         Config_single_reads::value_map_access const& vma,
         boost::property_tree::ptree const& pt,
         Pipe_environment& pe
) {
   return create_step_single(vma, pt, pe);
}

}//namespace vdj_pipe
#endif /* STEP_FACTORY_SINGLE_HPP_ */