7 #ifndef SEQUENCE_MERGE_HPP_ 8 #define SEQUENCE_MERGE_HPP_ 36 std::string
const&
s1,
38 std::string
const&
s2,
40 const unsigned min_score,
void merge(std::string const &s1, Seq_qual_record::quality const &qv1, std::string const &s2, Seq_qual_record::quality const &qv2, const unsigned min_score, Merge_result &mr)
Definition: sequence_merge.cpp:19
std::string cigar_
Definition: sequence_merge.hpp:30
Definition: sequence_record.hpp:35
unsigned score_
Definition: sequence_merge.hpp:28
const std::string s2
Definition: short_seq_map_run.cpp:18
Seq_record::sequence sequence
Definition: sequence_merge.hpp:20
const std::string s1
Definition: short_seq_map_run.cpp:17
Qual_record::quality quality
Definition: sequence_merge.hpp:21
Main namespace of vdj_pipe library.
Definition: keywords_variable.hpp:11
Definition: sequence_merge.hpp:19
#define VDJ_PIPE_DECL
Definition: config.hpp:23
std::string sequence
Definition: sequence_record.hpp:29
sequence seq_
Definition: sequence_merge.hpp:23
quality qual_
Definition: sequence_merge.hpp:26