Test List

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (me_relative_interval_01)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (value_names_run_03)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (value_names_run_02)

paired reads variable IDs

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (value_names_run_01)

single read variable IDs

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (case07)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (seq_files)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (max_reads_2)

max reads

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (path_decompose_run_01)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (case06)

Parse file.gz

Parse file - get record

Parse file.gz

Parse file - get record

Parse file.gz

Parse file - get record

Parse file.gz

Parse file - get record

Parse file.gz

Parse file - get record

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (match_step_run_03)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (match_step_run_02)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (match_scan_element)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (match_element_at_end)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (match_3_elements_01)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (parse_combinations_csv_file_3)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (parse_combinations_csv_file_2)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (parse_combinations_csv_file_1)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (match_element_run_01)

Match positional element

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (find_intersection_run_01)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (file_ostream_variant_run_04)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (file_ostream_variant_run_03)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (file_ostream_variant_run_02)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (file_ostream_variant_run_01)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (file_ostream_queue_run_02)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (file_ostream_queue_run_01)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (case05)

Parse file.gz

homopolymer

Parse file - get ID, sequence, and quality

homopolymer

Parse file - get ID, sequence, and quality

homopolymer

Parse file - get ID, sequence, and quality

homopolymer

Parse file - get ID, sequence, and quality

homopolymer

Parse file - get ID, sequence, and quality

homopolymer

Parse file - get ID, sequence, and quality

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (case04)

Parse file

Parse file - get IDs and sequence only

Parse file - get IDs and sequence only

Parse file - get IDs and sequence only

Parse file - get IDs and sequence only

Parse file - get IDs and sequence only

Parse file - get IDs and sequence only

Parse file - get IDs and sequence only

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (case03)

Parse file.qual.bz2

test delimiter

Parse file - get IDs only

test for ambiguous nucleotides

test delimiter

Parse file - get IDs only

test for ambiguous nucleotides

test delimiter

Parse file - get IDs only

test for ambiguous nucleotides

test delimiter

Parse file - get IDs only

test for ambiguous nucleotides

test delimiter

Parse file - get IDs only

test for ambiguous nucleotides

test delimiter

Parse file - get IDs only

test for ambiguous nucleotides

test delimiter

Parse file - get IDs only

test for ambiguous nucleotides

test delimiter

Parse file - get IDs only

test for ambiguous nucleotides

test delimiter

Parse file - get IDs only

test for ambiguous nucleotides

test delimiter

Parse file - get IDs only

test for ambiguous nucleotides

test delimiter

Parse file - get IDs only

test for ambiguous nucleotides

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (case02)

max reads

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

copying

ID iterator

check scoring matrix

finding longest interval with fewer ambiguous bases

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (case01)

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

input files

check scoring matrix symmetry

finding longest interval with average above min

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (me_relative_interval_04)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (me_relative_interval_03)

Member vdj_pipe::test::BOOST_AUTO_TEST_CASE (me_relative_interval_02)