vdj_pipe
pipeline for processing DNA sequence data
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This is the complete list of members for vdj_pipe::Input_manager, including all inherited members.
begin() const (defined in vdj_pipe::Input_manager) | vdj_pipe::Input_manager | inline |
const_iterator typedef (defined in vdj_pipe::Input_manager) | vdj_pipe::Input_manager | |
empty() const (defined in vdj_pipe::Input_manager) | vdj_pipe::Input_manager | inline |
end() const (defined in vdj_pipe::Input_manager) | vdj_pipe::Input_manager | inline |
has_emid() const | vdj_pipe::Input_manager | inline |
has_quality() const | vdj_pipe::Input_manager | inline |
Input_manager(std::string const &base, boost::property_tree::ptree const &pt, Value_map &vm) (defined in vdj_pipe::Input_manager) | vdj_pipe::Input_manager | |
Input_manager(std::string const &base, const bool is_paired=false, const bool has_emid=false, const bool has_qual=true) (defined in vdj_pipe::Input_manager) | vdj_pipe::Input_manager | inline |
is_paired() const | vdj_pipe::Input_manager | inline |
iterator typedef (defined in vdj_pipe::Input_manager) | vdj_pipe::Input_manager | |
path(std::string const &root, std::string const &fn) (defined in vdj_pipe::Input_manager) | vdj_pipe::Input_manager | static |
path(std::string const &fn) const (defined in vdj_pipe::Input_manager) | vdj_pipe::Input_manager | inline |
size() const (defined in vdj_pipe::Input_manager) | vdj_pipe::Input_manager | inline |