| delimiter() const (defined in vdj_pipe::detail::Step_base) | vdj_pipe::detail::Step_base | inline |
| Filter_base(vma_type const &vma, boost::property_tree::ptree const &pt, Pipe_environment &pe) (defined in vdj_pipe::detail::Filter_base) | vdj_pipe::detail::Filter_base | protected |
| finish() (defined in vdj_pipe::Length_filter) | vdj_pipe::Length_filter | inline |
| nf_ (defined in vdj_pipe::detail::Filter_base) | vdj_pipe::detail::Filter_base | protected |
| nt_ (defined in vdj_pipe::detail::Window_filter_base) | vdj_pipe::detail::Window_filter_base | protected |
| pass(const bool b) (defined in vdj_pipe::detail::Filter_base) | vdj_pipe::detail::Filter_base | inlineprotected |
| pass_id_ (defined in vdj_pipe::detail::Filter_base) | vdj_pipe::detail::Filter_base | protected |
| pe (defined in vdj_pipe::Length_filter) | vdj_pipe::Length_filter | |
| pt (defined in vdj_pipe::Length_filter) | vdj_pipe::Length_filter | |
| qual_type typedef (defined in vdj_pipe::detail::Step_base) | vdj_pipe::detail::Step_base | |
| reset_access(Value_ids_single const &ids) (defined in vdj_pipe::detail::Step_base_single) | vdj_pipe::detail::Step_base_single | inline |
| run() (defined in vdj_pipe::Length_filter) | vdj_pipe::Length_filter | |
| seq_type typedef (defined in vdj_pipe::detail::Step_base) | vdj_pipe::detail::Step_base | |
| Step_base(boost::property_tree::ptree const &pt, Pipe_environment const &pe) (defined in vdj_pipe::detail::Step_base) | vdj_pipe::detail::Step_base | |
| Step_base_single(vma_type const &vma, boost::property_tree::ptree const &pt, Pipe_environment const &pe) (defined in vdj_pipe::detail::Step_base_single) | vdj_pipe::detail::Step_base_single | inlineprotected |
| summary(std::ostream &os) const (defined in vdj_pipe::detail::Window_filter_base) | vdj_pipe::detail::Window_filter_base | |
| trim(sequence_interval const &si) (defined in vdj_pipe::detail::Window_filter_base) | vdj_pipe::detail::Window_filter_base | inlineprotected |
| VDJ_PIPE_KEYWORD_STRUCT(kwds,(passed_name)) (defined in vdj_pipe::detail::Filter_base) | vdj_pipe::detail::Filter_base | protected |
| VDJ_PIPE_STATIC_STRING_METHOD(comment,"discard reads with length outside of [min, max] rage") Length_filter(Vm_access_single const &vma (defined in vdj_pipe::Length_filter) | vdj_pipe::Length_filter | |
| vma_ (defined in vdj_pipe::detail::Step_base_single) | vdj_pipe::detail::Step_base_single | protected |
| vma_type typedef (defined in vdj_pipe::detail::Step_base_single) | vdj_pipe::detail::Step_base_single | |
| Window_filter_base(vma_type const &vma, boost::property_tree::ptree const &pt, Pipe_environment &pe) (defined in vdj_pipe::detail::Window_filter_base) | vdj_pipe::detail::Window_filter_base | inlineprotected |
1.8.11
