vdj_pipe
pipeline for processing DNA sequence data
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This is the complete list of members for vdj_pipe::File_ostream_variant, including all inherited members.
File_ostream_variant(const format::Format fmt) | vdj_pipe::File_ostream_variant | |
File_ostream_variant(std::string const &path, std::string const &unset_element, Value_map const &vm, std::string const &header="", const compression::Compression compr=compression::unknown, format::Format fmt=format::unknown, const std::size_t queue_size=500) | vdj_pipe::File_ostream_variant | |
File_ostream_variant(std::vector< Val_id > const &var_ids, path_template const &pt, std::string const &unset_element, std::string const &header="", const compression::Compression compr=compression::unknown, format::Format fmt=format::unknown, const std::size_t queue_size=500) | vdj_pipe::File_ostream_variant | |
fos_ | vdj_pipe::File_ostream_variant | private |
fosq_ | vdj_pipe::File_ostream_variant | private |
idv_ | vdj_pipe::File_ostream_variant | private |
init_queue(std::string const &path, Value_map const &vm, std::string const &header, format::Format fmt, const std::size_t queue_size) | vdj_pipe::File_ostream_variant | private |
init_queue(path_template const &pt, std::string const &header, format::Format fmt, const std::size_t queue_size) | vdj_pipe::File_ostream_variant | private |
init_single(std::string const &path, std::string const &header, const compression::Compression compr, format::Format fmt) | vdj_pipe::File_ostream_variant | private |
ostream() | vdj_pipe::File_ostream_variant | inline |
ostream(Value_map const &vm) | vdj_pipe::File_ostream_variant | |
ostream(val_vector const &vv) | vdj_pipe::File_ostream_variant | |
path_template typedef | vdj_pipe::File_ostream_variant | private |
size() const | vdj_pipe::File_ostream_variant | |
skip_empty() | vdj_pipe::File_ostream_variant | inlinestatic |
skip_empty_ | vdj_pipe::File_ostream_variant | private |
unset_element_ | vdj_pipe::File_ostream_variant | private |
val_ref_vector typedef | vdj_pipe::File_ostream_variant | private |
val_vector typedef | vdj_pipe::File_ostream_variant | private |
value_type typedef | vdj_pipe::File_ostream_variant | private |
variable_ids() const | vdj_pipe::File_ostream_variant | inline |