vdj_pipe
pipeline for processing DNA sequence data
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vdj_pipe
Seq_file_entry
vdj_pipe::Seq_file_entry Member List
This is the complete list of members for
vdj_pipe::Seq_file_entry
, including all inherited members.
begin
() const
vdj_pipe::Seq_file_entry
inline
check
(Input_manager const &im)
vdj_pipe::Seq_file_entry
private
const_iterator
typedef
vdj_pipe::Seq_file_entry
end
() const
vdj_pipe::Seq_file_entry
inline
fastq
enum value
vdj_pipe::Seq_file_entry
private
get_str
(const Val_id id, std::string const &msg) const
vdj_pipe::Seq_file_entry
inline
private
has_emid
() const
vdj_pipe::Seq_file_entry
inline
has_qual_file
() const
vdj_pipe::Seq_file_entry
inline
has_quality
() const
vdj_pipe::Seq_file_entry
inline
is_paired
() const
vdj_pipe::Seq_file_entry
inline
iterator
typedef
vdj_pipe::Seq_file_entry
map_
vdj_pipe::Seq_file_entry
private
map_t
typedef
vdj_pipe::Seq_file_entry
mid
() const
vdj_pipe::Seq_file_entry
inline
mid_
vdj_pipe::Seq_file_entry
private
mid_rev
() const
vdj_pipe::Seq_file_entry
inline
mid_rev_
vdj_pipe::Seq_file_entry
private
none
enum value
vdj_pipe::Seq_file_entry
private
qt_
vdj_pipe::Seq_file_entry
private
qual
enum value
vdj_pipe::Seq_file_entry
private
qual_
vdj_pipe::Seq_file_entry
private
qual_rev
() const
vdj_pipe::Seq_file_entry
inline
qual_rev_
vdj_pipe::Seq_file_entry
private
qual_type
enum name
vdj_pipe::Seq_file_entry
private
quality
() const
vdj_pipe::Seq_file_entry
inline
seq_
vdj_pipe::Seq_file_entry
private
Seq_file_entry
(map_t const &m, Input_manager const &im, Value_map const &vm)
vdj_pipe::Seq_file_entry
seq_rev
() const
vdj_pipe::Seq_file_entry
inline
seq_rev_
vdj_pipe::Seq_file_entry
private
sequence
() const
vdj_pipe::Seq_file_entry
inline
value_type
typedef
vdj_pipe::Seq_file_entry
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