vdj_pipe
pipeline for processing DNA sequence data
vdj_pipe::Seq_map_full Member List

This is the complete list of members for vdj_pipe::Seq_map_full, including all inherited members.

allow_duplicate_seq_vdj_pipe::Seq_map_fullprivate
begin() const vdj_pipe::Seq_map_fullinline
const_iterator typedefvdj_pipe::Seq_map_full
end() const vdj_pipe::Seq_map_fullinline
find_closest(const Seq s, match_type &m, scoring_matrix_t const &sm) const vdj_pipe::Seq_map_fullinline
find_exact(seq_type const &seq) const vdj_pipe::Seq_map_fullinline
find_exact(const boost::string_ref seq) const vdj_pipe::Seq_map_fullinline
insert(std::string name, std::string const &seq)vdj_pipe::Seq_map_fullinline
iterator typedefvdj_pipe::Seq_map_full
match_type typedefvdj_pipe::Seq_map_full
max_id() const vdj_pipe::Seq_map_fullinline
max_len() const vdj_pipe::Seq_map_fullinline
max_len_vdj_pipe::Seq_map_fullprivate
min_len() const vdj_pipe::Seq_map_fullinline
min_len_vdj_pipe::Seq_map_fullprivate
name(const Mid_id id) const vdj_pipe::Seq_map_fullinline
name_map typedefvdj_pipe::Seq_map_fullprivate
names_vdj_pipe::Seq_map_fullprivate
seq(const Mid_id id) const vdj_pipe::Seq_map_fullinline
seq_map typedefvdj_pipe::Seq_map_fullprivate
Seq_map_full(const bool allow_duplicate_seq=false)vdj_pipe::Seq_map_fullinlineexplicit
seq_string(const Mid_id id) const vdj_pipe::Seq_map_fullinline
seq_type typedefvdj_pipe::Seq_map_full
seqs_vdj_pipe::Seq_map_fullprivate
to_string(seq_type const &sv)vdj_pipe::Seq_map_fullinlinestatic
to_vector(const boost::string_ref s)vdj_pipe::Seq_map_fullinlineprivatestatic