vdj_pipe
pipeline for processing DNA sequence data
vdj_pipe::Seq_map_short Member List

This is the complete list of members for vdj_pipe::Seq_map_short, including all inherited members.

allow_duplicate_seq_vdj_pipe::Seq_map_shortprivate
begin() const vdj_pipe::Seq_map_shortinline
const_iterator typedefvdj_pipe::Seq_map_short
end() const vdj_pipe::Seq_map_shortinline
find_closest(const Seq s, match_type &m, scoring_matrix_t const &sm) const vdj_pipe::Seq_map_shortinline
find_exact(const seq_type seq) const vdj_pipe::Seq_map_shortinline
find_exact(const boost::string_ref seq) const vdj_pipe::Seq_map_shortinline
insert(std::string name, std::string const &seq)vdj_pipe::Seq_map_shortinline
iterator typedefvdj_pipe::Seq_map_short
match_type typedefvdj_pipe::Seq_map_short
max_id() const vdj_pipe::Seq_map_shortinline
mid_size_vdj_pipe::Seq_map_shortprivate
name(const Mid_id id) const vdj_pipe::Seq_map_shortinline
name_map typedefvdj_pipe::Seq_map_shortprivate
names_vdj_pipe::Seq_map_shortprivate
seq(const Mid_id id) const vdj_pipe::Seq_map_shortinline
seq_map typedefvdj_pipe::Seq_map_shortprivate
Seq_map_short(const bool allow_duplicate_seq)vdj_pipe::Seq_map_shortinlineexplicit
seq_size() const vdj_pipe::Seq_map_shortinline
seq_string(const Mid_id id) const vdj_pipe::Seq_map_shortinline
seq_type typedefvdj_pipe::Seq_map_short
seqs_vdj_pipe::Seq_map_shortprivate