vdj_pipe
pipeline for processing DNA sequence data
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#include <limits>
#include "boost/foreach.hpp"
#include "boost/utility/string_ref.hpp"
#include "me_relative_interval.hpp"
#include "sequence_map_full.hpp"
#include "sequence_map_types.hpp"
#include "me_types.hpp"
#include "vdj_pipe/exception.hpp"
#include "vdj_pipe/object_ids.hpp"
#include "vdj_pipe/sequence_record.hpp"
#include "vdj_pipe/value_map.hpp"
Go to the source code of this file.
Classes | |
class | vdj_pipe::match::Match_element_ambiguous |
Find best match between DNA sequence interval and a set of sequences without gaps that may include ambiguous nucleotides. More... | |
struct | vdj_pipe::match::Match_element_ambiguous::Err |
Namespaces | |
vdj_pipe | |
Main namespace of vdj_pipe library. | |
vdj_pipe::match | |
part of vdj_pipe project.
Distributed under GNU General Public License, Version 3; see doc/license.txt.
Copyright Mikhail K Levin 2014