me_short.hpp File Reference

#include "boost/foreach.hpp"
#include "boost/utility/string_ref.hpp"
#include "me_relative_interval.hpp"
#include "me_types.hpp"
#include "sequence_map_short.hpp"
#include "sequence_map_types.hpp"
#include "vdj_pipe/exception.hpp"
#include "vdj_pipe/object_ids.hpp"
#include "vdj_pipe/sequence_record.hpp"
#include "vdj_pipe/value_map.hpp"

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Classes
class	vdj_pipe::match::Match_element_short
	Find best match between DNA sequence interval and a set of short sequences without gaps. More...
struct	vdj_pipe::match::Match_element_short::Err

Namespaces
	vdj_pipe
	Main namespace of vdj_pipe library.
	vdj_pipe::match

Detailed Description

part of vdj_pipe project.

Distributed under GNU General Public License, Version 3; see doc/license.txt.
Copyright Mikhail K Levin 2014