sample_sequences.hpp File Reference

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Namespaces
	vdj_pipe
	Main namespace of vdj_pipe library.
	vdj_pipe::test
	Namespace for unit-tests.

Variables
const std::string	vdj_pipe::test::seq1c = "ACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAA"
const std::string	vdj_pipe::test::seq3
const std::string	vdj_pipe::test::seq4
const std::string	vdj_pipe::test::seq5 = seq3 + seq2
const std::string	vdj_pipe::test::seq6
const std::string	vdj_pipe::test::seq7
const std::string	vdj_pipe::test::filter1 = "{ \"type\": \"min_length\", \"min\": 100 }"
const std::string	vdj_pipe::test::filter2 = "{ \"type\": \"min_quality\", \"min\": 10 }"
const std::string	vdj_pipe::test::filter3 = "{ \"type\": \"nucleotides\" }"
const std::string	vdj_pipe::test::filter4 = "{ \"type\": \"mean_quality\", \"min\": 30 }"
const std::string	vdj_pipe::test::filter5
const std::string	vdj_pipe::test::filter6 = "{ \"type\": \"homopolymer\", \"max\": 10 }"

Detailed Description

part of vdj_pipe project.

Distributed under GNU General Public License, Version 3; see doc/license.txt.
Copyright Mikhail K Levin 2013