vdj_pipe
pipeline for processing DNA sequence data
step_base_paired_emid.hpp
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1 
7 #ifndef STEP_BASE_PAIRED_EMID_HPP_
8 #define STEP_BASE_PAIRED_EMID_HPP_
11 
12 namespace vdj_pipe{ namespace detail{
13 
17 public:
19 
20 protected:
22  vma_type const& vma,
25  )
26  : Step_base(pt, pe), vma_(vma)
27  {}
28 
29  vma_type vma_;
30 };
31 
32 }//namespace detail
33 }//namespace vdj_pipe
34 #endif /* STEP_BASE_PAIRED_EMID_HPP_ */
Definition: step_base_paired_emid.hpp:16
vma_type vma_
Definition: step_base_paired_emid.hpp:29
Access to value map for paired eMID read pipeline and processing steps.
Definition: value_map_access_paired.hpp:145
Main namespace of vdj_pipe library.
Definition: keywords_variable.hpp:11
Definition: pipe_environment.hpp:26
Definition: step_base.hpp:23
Vm_access_paired_emid vma_type
Definition: step_base_paired_emid.hpp:18
Step_base_paired_emid(vma_type const &vma, boost::property_tree::ptree const &pt, Pipe_environment &pe)
Definition: step_base_paired_emid.hpp:21
bpt::ptree ptree
Definition: processing_step_utils.hpp:19