vdj_pipe
pipeline for processing DNA sequence data
Public Types | Public Member Functions | List of all members
vdj_pipe::Apply_one Class Reference

Apply enclosed processing step once to a sequence read of specified kind: forward, reverse, or merged. More...

#include <apply_to_adaptor.hpp>

Public Types

typedef Vm_access_paired vma_type
 

Public Member Functions

 VDJ_PIPE_STATIC_STRING_METHOD (comment,"apply specified step to either forward, reverse, or merged sequences") Apply_one(step_variant_single const &step)
 
void run ()
 
void finish ()
 
void summary (std::ostream &os) const
 

Detailed Description

Apply enclosed processing step once to a sequence read of specified kind: forward, reverse, or merged.


The documentation for this class was generated from the following file: