vdj_pipe
pipeline for processing DNA sequence data
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This is the complete list of members for vdj_pipe::File_ostream, including all inherited members.
compr_ (defined in vdj_pipe::File) | vdj_pipe::File | protected |
compression() const (defined in vdj_pipe::File) | vdj_pipe::File | inline |
File(std::string const &path, const compression::Compression compr=compression::unknown, const format::Format fmt=format::unknown) (defined in vdj_pipe::File) | vdj_pipe::File | inlineexplicit |
File_ostream(const format::Format fmt) (defined in vdj_pipe::File_ostream) | vdj_pipe::File_ostream | |
File_ostream(File_output const &fout, const std::ios_base::openmode mode=(std::ios_base::openmode) 0) (defined in vdj_pipe::File_ostream) | vdj_pipe::File_ostream | explicit |
File_output(const format::Format fmt) (defined in vdj_pipe::File_output) | vdj_pipe::File_output | inline |
File_output(std::string const &path, const compression::Compression compr=compression::unknown, const format::Format fmt=format::unknown) (defined in vdj_pipe::File_output) | vdj_pipe::File_output | inlineexplicit |
fmt_ (defined in vdj_pipe::File) | vdj_pipe::File | protected |
format() const (defined in vdj_pipe::File) | vdj_pipe::File | inline |
operator<(File const &f2) const (defined in vdj_pipe::File) | vdj_pipe::File | inline |
operator==(File const &f2) const (defined in vdj_pipe::File) | vdj_pipe::File | inline |
ostream() (defined in vdj_pipe::File_ostream) | vdj_pipe::File_ostream | inline |
path() const (defined in vdj_pipe::File) | vdj_pipe::File | inline |
path_ (defined in vdj_pipe::File) | vdj_pipe::File | protected |
write(std::string const &descr, Seq_record::sequence const &seq) (defined in vdj_pipe::File_ostream) | vdj_pipe::File_ostream | |
write(std::string const &descr, const boost::string_ref seq) (defined in vdj_pipe::File_ostream) | vdj_pipe::File_ostream | |
write(std::string const &descr, Qual_record::quality const &qual) (defined in vdj_pipe::File_ostream) | vdj_pipe::File_ostream | |
write(std::string const &descr, Seq_record::sequence const &seq, Qual_record::quality const &qual) (defined in vdj_pipe::File_ostream) | vdj_pipe::File_ostream |