Inheritance diagram for vdj_pipe::File_ostream:

Collaboration diagram for vdj_pipe::File_ostream:

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Public Member Functions
	File_ostream (const format::Format fmt)

	File_ostream (File_output const &fout, const std::ios_base::openmode mode=(std::ios_base::openmode) 0)

std::ostream &	ostream ()

void	write (std::string const &descr, Seq_record::sequence const &seq)

void	write (std::string const &descr, const boost::string_ref seq)

void	write (std::string const &descr, Qual_record::quality const &qual)

void	write (std::string const &descr, Seq_record::sequence const &seq, Qual_record::quality const &qual)

Public Member Functions inherited from vdj_pipe::File_output
	File_output (const format::Format fmt)

	File_output (std::string const &path, const compression::Compression compr=compression::unknown, const format::Format fmt=format::unknown)

Public Member Functions inherited from vdj_pipe::File
	File (std::string const &path, const compression::Compression compr=compression::unknown, const format::Format fmt=format::unknown)

std::string const &	path () const

format::Format	format () const

compression::Compression	compression () const

bool	operator== (File const &f2) const

bool	operator< (File const &f2) const

Additional Inherited Members
Protected Attributes inherited from vdj_pipe::File
std::string	path_

compression::Compression	compr_

format::Format	fmt_

The documentation for this class was generated from the following file:

Classes

Public Member Functions