vdj_pipe
pipeline for processing DNA sequence data
vdj_pipe::Pipeline< Config > Member List

This is the complete list of members for vdj_pipe::Pipeline< Config >, including all inherited members.

add_step(boost::property_tree::ptree const &pt) (defined in vdj_pipe::Pipeline< Config >)vdj_pipe::Pipeline< Config >inline
add_step(processing_step const &step) (defined in vdj_pipe::Pipeline< Config >)vdj_pipe::Pipeline< Config >inline
finalize() (defined in vdj_pipe::Pipeline< Config >)vdj_pipe::Pipeline< Config >inline
name() (defined in vdj_pipe::Pipeline< Config >)vdj_pipe::Pipeline< Config >inlinestatic
Pipeline(Pipe_environment const &pe) (defined in vdj_pipe::Pipeline< Config >)vdj_pipe::Pipeline< Config >inlineexplicit
Pipeline(boost::property_tree::ptree const &pt, Pipe_environment const &pe) (defined in vdj_pipe::Pipeline< Config >)vdj_pipe::Pipeline< Config >inline
process_read() (defined in vdj_pipe::Pipeline< Config >)vdj_pipe::Pipeline< Config >inline
run() (defined in vdj_pipe::Pipeline< Config >)vdj_pipe::Pipeline< Config >inline
size() const (defined in vdj_pipe::Pipeline< Config >)vdj_pipe::Pipeline< Config >inline
step(const std::size_t n) const (defined in vdj_pipe::Pipeline< Config >)vdj_pipe::Pipeline< Config >inline
value_map() const (defined in vdj_pipe::Pipeline< Config >)vdj_pipe::Pipeline< Config >inline
value_map() (defined in vdj_pipe::Pipeline< Config >)vdj_pipe::Pipeline< Config >inline