vdj_pipe
pipeline for processing DNA sequence data
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Public Member Functions | |
Read_info (const boost::string_ref name) | |
Read_info (const boost::string_ref name, const Path_id seq_file, const unsigned len, const bool reverse) | |
const std::string & | name () const |
unsigned | size () const |
bool | empty () const |
Path_id | seq_file () const |
bool | is_reverse () const |
sequence_interval const & | trim () const |
Read_info & | reverse (const bool rev) |
Read_info & | seq_file (const Path_id pid) |
Read_info & | trim (const unsigned lo, const unsigned hi) |
Read_info & | trim (sequence_interval const &si) |
void | combine (Read_info const &si) |