vdj_pipe
pipeline for processing DNA sequence data
Public Member Functions | List of all members
vdj_pipe::Read_info Class Reference

Public Member Functions

 Read_info (const boost::string_ref name)
 
 Read_info (const boost::string_ref name, const Path_id seq_file, const unsigned len, const bool reverse)
 
const std::string & name () const
 
unsigned size () const
 
bool empty () const
 
Path_id seq_file () const
 
bool is_reverse () const
 
sequence_interval const & trim () const
 
Read_inforeverse (const bool rev)
 
Read_infoseq_file (const Path_id pid)
 
Read_infotrim (const unsigned lo, const unsigned hi)
 
Read_infotrim (sequence_interval const &si)
 
void combine (Read_info const &si)
 

The documentation for this class was generated from the following file: