vdj_pipe
pipeline for processing DNA sequence data
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This is the complete list of members for vdj_pipe::Seq_file, including all inherited members.
compr_ (defined in vdj_pipe::File) | vdj_pipe::File | protected |
compression() const (defined in vdj_pipe::File) | vdj_pipe::File | inline |
File(std::string const &path, const compression::Compression compr=compression::unknown, const format::Format fmt=format::unknown) (defined in vdj_pipe::File) | vdj_pipe::File | inlineexplicit |
File_input(std::string const &path) (defined in vdj_pipe::File_input) | vdj_pipe::File_input | inlineexplicit |
fmt_ (defined in vdj_pipe::File) | vdj_pipe::File | protected |
format() const (defined in vdj_pipe::File) | vdj_pipe::File | inline |
id() const (defined in vdj_pipe::Seq_file) | vdj_pipe::Seq_file | inline |
is_reverse() const (defined in vdj_pipe::Seq_file) | vdj_pipe::Seq_file | inline |
operator<(File const &f2) const (defined in vdj_pipe::File) | vdj_pipe::File | inline |
operator==(File const &f2) const (defined in vdj_pipe::File) | vdj_pipe::File | inline |
path() const (defined in vdj_pipe::File) | vdj_pipe::File | inline |
path_ (defined in vdj_pipe::File) | vdj_pipe::File | protected |
reverse(const bool rev) (defined in vdj_pipe::Seq_file) | vdj_pipe::Seq_file | inline |
Seq_file(std::string const &path, const bool reverse=false) (defined in vdj_pipe::Seq_file) | vdj_pipe::Seq_file | inlineexplicit |
Seq_file_map (defined in vdj_pipe::Seq_file) | vdj_pipe::Seq_file | friend |