vdj_pipe
pipeline for processing DNA sequence data
vdj_pipe::Seq_file_entry Member List

This is the complete list of members for vdj_pipe::Seq_file_entry, including all inherited members.

begin() const (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entryinline
const_iterator typedef (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entry
end() const (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entryinline
has_emid() const (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entryinline
has_qual_file() const (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entryinline
has_quality() const (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entryinline
is_paired() const (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entryinline
iterator typedef (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entry
map_t typedef (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entry
mid() const (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entryinline
mid_rev() const (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entryinline
qual_rev() const (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entryinline
quality() const (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entryinline
Seq_file_entry(map_t const &m, Input_manager const &im, Value_map const &vm) (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entry
seq_rev() const (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entryinline
sequence() const (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entryinline
value_type typedef (defined in vdj_pipe::Seq_file_entry)vdj_pipe::Seq_file_entry