Provides access to standard values for single read pipeline. More...

Public Member Functions
	Value_ids_single (Value_map &vm, Value_names::single_read_names const &names)

Val_id	description () const

Val_id	sequence () const

Val_id	quality () const

Val_id	trim () const

Val_id	direction () const

Val_id	sequence_path () const

Val_id	quality_path () const

bool	is_reverse () const

Static Public Member Functions
static Value_ids_single	create (Value_map &vm, Value_names::single_read_names const &names)

static Value_ids_single	ensure (Value_map const &vm, Value_names::single_read_names const &names)

Detailed Description

Provides access to standard values for single read pipeline.

Constructor & Destructor Documentation

vdj_pipe::Value_ids_single::Value_ids_single	(	Value_map &	vm,
		Value_names::single_read_names const &	names
	)

names that are not in value map are created

static Value_ids_single vdj_pipe::Value_ids_single::create	(	Value_map &	vm,
		Value_names::single_read_names const &	names
	)

static

All names are added to value map; throws if name already exists

static Value_ids_single vdj_pipe::Value_ids_single::ensure	(	Value_map const &	vm,
		Value_names::single_read_names const &	names
	)

static

Ensure that names are already present in value map

The documentation for this class was generated from the following file: