Store suffixes Each leaf is attached to a branch and stores suffixes that have the length of the branch' index. Since the length of the suffixes is known, only the sequence ID is stored. More...

#include <nodes.hpp>

Inheritance diagram for vdj_pipe::gdst::Leaf:

[legend]

Collaboration diagram for vdj_pipe::gdst::Leaf:

[legend]

Additional Inherited Members
Public Types inherited from vdj_pipe::detail::Vector_set< Seq_id >
typedef Vector_set	self_type

typedef Seq_id	value_type

typedef std::size_t	size_type

typedef std::ptrdiff_t	difference_type

typedef stor_t::iterator	iterator

typedef stor_t::const_iterator	const_iterator

Public Member Functions inherited from vdj_pipe::detail::Vector_set< Seq_id >
iterator	begin ()

const_iterator	begin () const

iterator	end ()

const_iterator	end () const

value_type const &	front () const

value_type const &	back () const

std::size_t	size () const

bool	empty () const

void	reserve (const std::size_t n)

void	pop_back ()

void	clear ()

void	insert (Iter i1, Iter i2)

std::pair< iterator, bool >	insert (value_type const &t)

unsigned	erase (CompatType const &t)

value_type const *	find (CompatType const &t) const

value_type const &	operator[] (const std::size_t n) const

value_type &	operator[] (const std::size_t n)

value_type const &	at (const std::size_t n) const

value_type &	at (const std::size_t n)

bool	operator== (self_type const &vs2) const

bool	operator< (self_type const &vs2) const

Detailed Description

Store suffixes Each leaf is attached to a branch and stores suffixes that have the length of the branch' index. Since the length of the suffixes is known, only the sequence ID is stored.

The documentation for this class was generated from the following file:

include/vdj_pipe/gdst/nodes.hpp

Additional Inherited Members

Detailed Description