vdj_pipe
pipeline for processing DNA sequence data
Public Member Functions | Public Attributes | List of all members
vdj_pipe::gdst::Common_subseq Struct Reference

Common subsequence. More...

#include <common_subsequence.hpp>

Collaboration diagram for vdj_pipe::gdst::Common_subseq:
Collaboration graph
[legend]

Public Member Functions

 Common_subseq (const unsigned start=0, const unsigned len=0)
 

Public Attributes

unsigned start_
 match starting position in pattern
 
unsigned len_
 match length
 
detail::Vector_set< super_seqseq_
 

Detailed Description

Common subsequence.

Member Data Documentation

detail::Vector_set<super_seq> vdj_pipe::gdst::Common_subseq::seq_

set of sequence IDs and match starting positions


The documentation for this struct was generated from the following file: