vdj_pipe
pipeline for processing DNA sequence data
Classes | Namespaces
apply_to_adaptor.hpp File Reference
#include <vector>
#include "boost/foreach.hpp"
#include "boost/property_tree/ptree_fwd.hpp"
#include "boost/variant/static_visitor.hpp"
#include "vdj_pipe/config.hpp"
#include "vdj_pipe/detail/keyword_struct_macro.hpp"
#include "vdj_pipe/exception.hpp"
#include "vdj_pipe/step/all_single_read_steps.hpp"
#include "vdj_pipe/step/step_maker.hpp"
#include "vdj_pipe/step/step_variant_single_read.hpp"
#include "vdj_pipe/step/visitor.hpp"
#include "vdj_pipe/value_map_access_paired.hpp"
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Classes

class  vdj_pipe::Apply_one
 Apply enclosed processing step once to a sequence read of specified kind: forward, reverse, or merged. More...
 
class  vdj_pipe::Apply_many
 Apply enclosed processing step multiple times to sequence reads of specified kind: forward, reverse, or merged. More...
 
class  vdj_pipe::Apply_many::Visitor
 
class  vdj_pipe::step::Apply_to_maker
 
struct  vdj_pipe::step::Apply_to_maker::Err
 
struct  vdj_pipe::step::Find_maker< Apply_one >
 
struct  vdj_pipe::step::Find_maker< Apply_many >
 

Namespaces

 vdj_pipe
 Main namespace of vdj_pipe library.
 
 vdj_pipe::step
 

Detailed Description

part of vdj_pipe project.

Distributed under GNU General Public License, Version 3; see doc/license.txt.
Copyright Mikhail K Levin 2014