vdj_pipe
pipeline for processing DNA sequence data
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vdj_pipe
Input_manager
vdj_pipe::Input_manager Member List
This is the complete list of members for
vdj_pipe::Input_manager
, including all inherited members.
begin
() const
vdj_pipe::Input_manager
inline
check_dir
(std::string const &dir)
vdj_pipe::Input_manager
private
static
const_iterator
typedef
vdj_pipe::Input_manager
empty
() const
vdj_pipe::Input_manager
inline
end
() const
vdj_pipe::Input_manager
inline
has_emid
() const
vdj_pipe::Input_manager
inline
has_emid_
vdj_pipe::Input_manager
private
has_qual_
vdj_pipe::Input_manager
private
has_quality
() const
vdj_pipe::Input_manager
inline
in_v_t
typedef
vdj_pipe::Input_manager
private
Input_manager
(std::string const &base, boost::property_tree::ptree const &pt, Value_map &vm)
vdj_pipe::Input_manager
Input_manager
(std::string const &base, const bool is_paired=false, const bool has_emid=false, const bool has_qual=true)
vdj_pipe::Input_manager
inline
is_paired
() const
vdj_pipe::Input_manager
inline
is_paired_
vdj_pipe::Input_manager
private
iterator
typedef
vdj_pipe::Input_manager
iv_
vdj_pipe::Input_manager
private
path
(std::string const &root, std::string const &fn)
vdj_pipe::Input_manager
static
path
(std::string const &fn) const
vdj_pipe::Input_manager
inline
root_
vdj_pipe::Input_manager
private
size
() const
vdj_pipe::Input_manager
inline
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