vdj_pipe
pipeline for processing DNA sequence data
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This is the complete list of members for vdj_pipe::Merge_paired, including all inherited members.
cigar_id_ | vdj_pipe::Merge_paired | private |
delimiter() const | vdj_pipe::detail::Step_base | inline |
finish() | vdj_pipe::Merge_paired | inline |
Merge_paired(vma_type const &vma, boost::property_tree::ptree const &pt, Pipe_environment &pe) | vdj_pipe::Merge_paired | |
min_score_ | vdj_pipe::Merge_paired | private |
n_merged_ | vdj_pipe::Merge_paired | private |
qual_type typedef | vdj_pipe::detail::Step_base | |
run() | vdj_pipe::Merge_paired | |
score_id_ | vdj_pipe::Merge_paired | private |
seq_type typedef | vdj_pipe::detail::Step_base | |
Step_base(boost::property_tree::ptree const &pt, Pipe_environment const &pe) | vdj_pipe::detail::Step_base | |
Step_base_paired(Vm_access_paired const &vma, boost::property_tree::ptree const &pt, Pipe_environment &pe) | vdj_pipe::detail::Step_base_paired | inlineprotected |
summary(std::ostream &os) const | vdj_pipe::Merge_paired | |
trimmed_ | vdj_pipe::Merge_paired | private |
vis_ | vdj_pipe::Merge_paired | private |
vma_ | vdj_pipe::detail::Step_base_paired | protected |
vma_type typedef | vdj_pipe::Merge_paired |