Collaboration diagram for vdj_pipe::Read_info:

Public Member Functions
	Read_info (const boost::string_ref name)

	Read_info (const boost::string_ref name, const Path_id seq_file, const unsigned len, const bool reverse)

const std::string &	name () const

unsigned	size () const

bool	empty () const

Path_id	seq_file () const

bool	is_reverse () const

sequence_interval const &	trim () const

Read_info &	reverse (const bool rev)

Read_info &	seq_file (const Path_id pid)

Read_info &	trim (const unsigned lo, const unsigned hi)

Read_info &	trim (sequence_interval const &si)

void	combine (Read_info const &si)

Constructor & Destructor Documentation

vdj_pipe::Read_info::Read_info ( const boost::string_ref name )

inlineexplicit

inline

Member Function Documentation

void vdj_pipe::Read_info::combine ( Read_info const & si )

inline

bool vdj_pipe::Read_info::empty ( ) const

inline

bool vdj_pipe::Read_info::is_reverse ( ) const

inline

const std::string& vdj_pipe::Read_info::name ( ) const

inline

Read_info& vdj_pipe::Read_info::reverse ( const bool rev )

inline

Path_id vdj_pipe::Read_info::seq_file ( ) const

inline

Read_info& vdj_pipe::Read_info::seq_file ( const Path_id pid )

inline

unsigned vdj_pipe::Read_info::size ( ) const

inline

sequence_interval const& vdj_pipe::Read_info::trim ( ) const

inline

Read_info& vdj_pipe::Read_info::trim	(	const unsigned	lo,
		const unsigned	hi
	)

inline

Read_info& vdj_pipe::Read_info::trim ( sequence_interval const & si )

inline

std::string vdj_pipe::Read_info::name_

private

bool vdj_pipe::Read_info::reverse_

private

Path_id vdj_pipe::Read_info::seq_file_

private

sequence_interval vdj_pipe::Read_info::trim_

private

The documentation for this class was generated from the following file: