vdj_pipe
pipeline for processing DNA sequence data
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This is the complete list of members for vdj_pipe::Seq_file, including all inherited members.
compr_ | vdj_pipe::File | protected |
compression() const | vdj_pipe::File | inline |
File(std::string const &path, const compression::Compression compr=compression::unknown, const format::Format fmt=format::unknown) | vdj_pipe::File | inlineexplicit |
File_input(std::string const &path) | vdj_pipe::File_input | inlineexplicit |
fmt_ | vdj_pipe::File | protected |
format() const | vdj_pipe::File | inline |
id() const | vdj_pipe::Seq_file | inline |
is_reverse() const | vdj_pipe::Seq_file | inline |
is_reverse_ | vdj_pipe::Seq_file | private |
operator<(File const &f2) const | vdj_pipe::File | inline |
operator==(File const &f2) const | vdj_pipe::File | inline |
path() const | vdj_pipe::File | inline |
path_ | vdj_pipe::File | protected |
pid_ | vdj_pipe::Seq_file | private |
reverse(const bool rev) | vdj_pipe::Seq_file | inline |
Seq_file(std::string const &path, const bool reverse=false) | vdj_pipe::Seq_file | inlineexplicit |
Seq_file_map class | vdj_pipe::Seq_file | friend |