vdj_pipe::Seq_file Class Reference

#include <sequence_file.hpp>

Inheritance diagram for vdj_pipe::Seq_file:

Collaboration diagram for vdj_pipe::Seq_file:

Public Member Functions
	Seq_file (std::string const &path, const bool reverse=false)
Path_id	id () const
bool	is_reverse () const
Seq_file &	reverse (const bool rev)
Public Member Functions inherited from vdj_pipe::File_input
	File_input (std::string const &path)
Public Member Functions inherited from vdj_pipe::File
	File (std::string const &path, const compression::Compression compr=compression::unknown, const format::Format fmt=format::unknown)
std::string const &	path () const
format::Format	format () const
compression::Compression	compression () const
bool	operator== (File const &f2) const
bool	operator< (File const &f2) const

Private Attributes
Path_id	pid_
bool	is_reverse_

Friends
class	Seq_file_map

Additional Inherited Members
Protected Attributes inherited from vdj_pipe::File
std::string	path_
compression::Compression	compr_
format::Format	fmt_

Constructor & Destructor Documentation

vdj_pipe::Seq_file::Seq_file ( std::string const &  path, const bool  reverse = false  )

inlineexplicit

Member Function Documentation

Path_id vdj_pipe::Seq_file::id ( ) const

inline

bool vdj_pipe::Seq_file::is_reverse ( ) const

inline

Seq_file& vdj_pipe::Seq_file::reverse ( const bool  rev )

inline

Friends And Related Function Documentation

friend class Seq_file_map

friend

Member Data Documentation

bool vdj_pipe::Seq_file::is_reverse_

private

Path_id vdj_pipe::Seq_file::pid_

private

---

The documentation for this class was generated from the following file:

• include/vdj_pipe/sequence_file.hpp