vdj_pipe
pipeline for processing DNA sequence data
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vdj_pipe
Value_map
vdj_pipe::Value_map Member List
This is the complete list of members for
vdj_pipe::Value_map
, including all inherited members.
begin
() const
vdj_pipe::Value_map
inline
clear_values
()
vdj_pipe::Value_map
inline
const_iterator
typedef
vdj_pipe::Value_map
end
() const
vdj_pipe::Value_map
inline
file_read_count
() const
vdj_pipe::Value_map
inline
file_read_count_i
enum value
vdj_pipe::Value_map
private
file_read_count_incr
()
vdj_pipe::Value_map
inline
file_read_count_reset
()
vdj_pipe::Value_map
inline
find_id
(std::string const &name) const
vdj_pipe::Value_map
inline
insert_name
(std::string const &name)
vdj_pipe::Value_map
inline
insert_new_name
(std::string const &name)
vdj_pipe::Value_map
inline
iterator
typedef
vdj_pipe::Value_map
map_
vdj_pipe::Value_map
private
map_ptr
typedef
vdj_pipe::Value_map
private
map_type
typedef
vdj_pipe::Value_map
private
name
(const Val_id vid) const
vdj_pipe::Value_map
inline
operator[]
(const Val_id vid) const
vdj_pipe::Value_map
inline
operator[]
(const Val_id vid)
vdj_pipe::Value_map
inline
quality
(const Val_id qual_id, const Val_id trim_id, const bool trimmed, const bool reverse_compl) const
vdj_pipe::Value_map
inline
protected
read_count
() const
vdj_pipe::Value_map
inline
read_count_i
enum value
vdj_pipe::Value_map
private
read_count_incr
()
vdj_pipe::Value_map
inline
read_count_reset
()
vdj_pipe::Value_map
inline
read_id
() const
vdj_pipe::Value_map
inline
read_id
(std::string const &id)
vdj_pipe::Value_map
inline
read_id_i
enum value
vdj_pipe::Value_map
private
read_id_nothrow
() const
vdj_pipe::Value_map
inline
seq_file_name
() const
vdj_pipe::Value_map
inline
seq_file_name
(std::string const &fn)
vdj_pipe::Value_map
inline
seq_fn_i
enum value
vdj_pipe::Value_map
private
sequence
(const Val_id seq_id, const Val_id trim_id, const bool trimmed, const bool reverse_compl) const
vdj_pipe::Value_map
inline
protected
size
() const
vdj_pipe::Value_map
inline
str_nothrow
(const Val_id id) const
vdj_pipe::Value_map
inline
value
(std::string const &name) const
vdj_pipe::Value_map
inline
value
(const Val_id id) const
vdj_pipe::Value_map
inline
value_id
(std::string const &name) const
vdj_pipe::Value_map
inline
Value_map
()
vdj_pipe::Value_map
inline
value_ptr
(std::string const &name) const
vdj_pipe::Value_map
inline
value_ptr
(const Val_id id) const
vdj_pipe::Value_map
inline
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