vdj_pipe
pipeline for processing DNA sequence data
vdj_pipe::Value_map Member List

This is the complete list of members for vdj_pipe::Value_map, including all inherited members.

begin() const vdj_pipe::Value_mapinline
clear_values()vdj_pipe::Value_mapinline
const_iterator typedefvdj_pipe::Value_map
end() const vdj_pipe::Value_mapinline
file_read_count() const vdj_pipe::Value_mapinline
file_read_count_i enum valuevdj_pipe::Value_mapprivate
file_read_count_incr()vdj_pipe::Value_mapinline
file_read_count_reset()vdj_pipe::Value_mapinline
find_id(std::string const &name) const vdj_pipe::Value_mapinline
insert_name(std::string const &name)vdj_pipe::Value_mapinline
insert_new_name(std::string const &name)vdj_pipe::Value_mapinline
iterator typedefvdj_pipe::Value_map
map_vdj_pipe::Value_mapprivate
map_ptr typedefvdj_pipe::Value_mapprivate
map_type typedefvdj_pipe::Value_mapprivate
name(const Val_id vid) const vdj_pipe::Value_mapinline
operator[](const Val_id vid) const vdj_pipe::Value_mapinline
operator[](const Val_id vid)vdj_pipe::Value_mapinline
quality(const Val_id qual_id, const Val_id trim_id, const bool trimmed, const bool reverse_compl) const vdj_pipe::Value_mapinlineprotected
read_count() const vdj_pipe::Value_mapinline
read_count_i enum valuevdj_pipe::Value_mapprivate
read_count_incr()vdj_pipe::Value_mapinline
read_count_reset()vdj_pipe::Value_mapinline
read_id() const vdj_pipe::Value_mapinline
read_id(std::string const &id)vdj_pipe::Value_mapinline
read_id_i enum valuevdj_pipe::Value_mapprivate
read_id_nothrow() const vdj_pipe::Value_mapinline
seq_file_name() const vdj_pipe::Value_mapinline
seq_file_name(std::string const &fn)vdj_pipe::Value_mapinline
seq_fn_i enum valuevdj_pipe::Value_mapprivate
sequence(const Val_id seq_id, const Val_id trim_id, const bool trimmed, const bool reverse_compl) const vdj_pipe::Value_mapinlineprotected
size() const vdj_pipe::Value_mapinline
str_nothrow(const Val_id id) const vdj_pipe::Value_mapinline
value(std::string const &name) const vdj_pipe::Value_mapinline
value(const Val_id id) const vdj_pipe::Value_mapinline
value_id(std::string const &name) const vdj_pipe::Value_mapinline
Value_map()vdj_pipe::Value_mapinline
value_ptr(std::string const &name) const vdj_pipe::Value_mapinline
value_ptr(const Val_id id) const vdj_pipe::Value_mapinline