vdj_pipe
pipeline for processing DNA sequence data
vdj_pipe::Write_seq Member List

This is the complete list of members for vdj_pipe::Write_seq, including all inherited members.

delimiter() const vdj_pipe::detail::Step_baseinline
finish()vdj_pipe::Write_seqinline
fov_vdj_pipe::Write_seqprivate
n_seq_vdj_pipe::Write_seqprivate
pevdj_pipe::Write_seq
ptvdj_pipe::Write_seq
qual_type typedefvdj_pipe::detail::Step_base
reset_access(Value_ids_single const &ids)vdj_pipe::detail::Step_base_singleinline
reverse_vdj_pipe::Write_seqprivate
run()vdj_pipe::Write_seq
seq_type typedefvdj_pipe::detail::Step_base
skip_empty_vdj_pipe::Write_seqprivate
Step_base(boost::property_tree::ptree const &pt, Pipe_environment const &pe)vdj_pipe::detail::Step_base
Step_base_single(vma_type const &vma, boost::property_tree::ptree const &pt, Pipe_environment const &pe)vdj_pipe::detail::Step_base_singleinlineprotected
summary(std::ostream &os) const vdj_pipe::Write_seq
trim_vdj_pipe::Write_seqprivate
VDJ_PIPE_STATIC_STRING_METHOD(comment,"output sequences") Write_seq(Vm_access_single const &vmvdj_pipe::Write_seq
vma_vdj_pipe::detail::Step_base_singleprotected
vma_type typedefvdj_pipe::detail::Step_base_single