vdj_pipe
pipeline for processing DNA sequence data
Public Types | Public Member Functions | Protected Member Functions | Protected Attributes | List of all members
vdj_pipe::detail::Step_base_single Class Reference

#include <step_base_single.hpp>

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Public Types

typedef Vm_access_single vma_type
 
- Public Types inherited from vdj_pipe::detail::Step_base
typedef Seq_record::sequence seq_type
 
typedef Qual_record::quality qual_type
 

Public Member Functions

void reset_access (Value_ids_single const &ids)
 
- Public Member Functions inherited from vdj_pipe::detail::Step_base
char delimiter () const
 
 Step_base (boost::property_tree::ptree const &pt, Pipe_environment const &pe)
 
void summary (std::ostream &) const
 

Protected Member Functions

 Step_base_single (vma_type const &vma, boost::property_tree::ptree const &pt, Pipe_environment const &pe)
 

Protected Attributes

Vm_access_single vma_
 

Member Typedef Documentation

Constructor & Destructor Documentation

vdj_pipe::detail::Step_base_single::Step_base_single ( vma_type const &  vma,
boost::property_tree::ptree const &  pt,
Pipe_environment const &  pe 
)
inlineprotected

Member Function Documentation

void vdj_pipe::detail::Step_base_single::reset_access ( Value_ids_single const &  ids)
inline

Member Data Documentation

Vm_access_single vdj_pipe::detail::Step_base_single::vma_
protected

The documentation for this class was generated from the following file: