vdj_pipe
pipeline for processing DNA sequence data
vdj_pipe::detail::External_mid_base Member List

This is the complete list of members for vdj_pipe::detail::External_mid_base, including all inherited members.

Err typedefvdj_pipe::detail::External_mid_base
find_mid(const boost::string_ref seq, Value_map &vm)vdj_pipe::detail::External_mid_baseprotected
match_type typedefvdj_pipe::detail::External_mid_baseprivate
mid_size() const vdj_pipe::detail::External_mid_baseprotected
min_score_vdj_pipe::detail::External_mid_baseprivate
name_val_id_vdj_pipe::detail::External_mid_baseprivate
require_best_vdj_pipe::detail::External_mid_baseprivate
score_val_id_vdj_pipe::detail::External_mid_baseprivate
scoring_matrix_vdj_pipe::detail::External_mid_baseprivate
smf_vdj_pipe::detail::External_mid_baseprivate
sms_vdj_pipe::detail::External_mid_baseprivate
VDJ_PIPE_KEYWORD_STRUCT(kwds,(fasta_path)(pairs_path)(value_name)(min_score)(max_mismatches)(require_best))vdj_pipe::detail::External_mid_baseprotected