vdj_pipe
pipeline for processing DNA sequence data
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This is the complete list of members for vdj_pipe::detail::External_mid_base, including all inherited members.
Err typedef | vdj_pipe::detail::External_mid_base | |
find_mid(const boost::string_ref seq, Value_map &vm) | vdj_pipe::detail::External_mid_base | protected |
match_type typedef | vdj_pipe::detail::External_mid_base | private |
mid_size() const | vdj_pipe::detail::External_mid_base | protected |
min_score_ | vdj_pipe::detail::External_mid_base | private |
name_val_id_ | vdj_pipe::detail::External_mid_base | private |
require_best_ | vdj_pipe::detail::External_mid_base | private |
score_val_id_ | vdj_pipe::detail::External_mid_base | private |
scoring_matrix_ | vdj_pipe::detail::External_mid_base | private |
smf_ | vdj_pipe::detail::External_mid_base | private |
sms_ | vdj_pipe::detail::External_mid_base | private |
VDJ_PIPE_KEYWORD_STRUCT(kwds,(fasta_path)(pairs_path)(value_name)(min_score)(max_mismatches)(require_best)) | vdj_pipe::detail::External_mid_base | protected |