vdj_pipe
pipeline for processing DNA sequence data
vdj_pipe::match::Match_element_positional Member List

This is the complete list of members for vdj_pipe::match::Match_element_positional, including all inherited members.

finish()vdj_pipe::match::Match_element_positionalinline
Match_element_positional(Value_map const &, std::string const &, const std::size_t, const std::size_t, const std::size_t)vdj_pipe::match::Match_element_positionalprivate
Match_element_positional(Value_map const &vm, std::string const &match_value_name, Relative_interval const &ri)vdj_pipe::match::Match_element_positionalinline
Match_element_positional(Value_map const &vm, std::string const &match_value_name, const int pos, const bool re_start, const int length)vdj_pipe::match::Match_element_positionalinline
name_val_id_vdj_pipe::match::Match_element_positionalprivate
operator()(const sequence seq, quality const &, sequence_interval const &si)vdj_pipe::match::Match_element_positionalinline
quality typedefvdj_pipe::match::Match_element_positional
result(const sequence seq=sequence(), sequence_interval const &si=sequence_interval_invalid())vdj_pipe::match::Match_element_positionalinlineprivate
ri_vdj_pipe::match::Match_element_positionalprivate
sequence typedefvdj_pipe::match::Match_element_positional
vm_vdj_pipe::match::Match_element_positionalprivate