Sequence position defined relatively to an interval. More...

Public Member Functions
	Relative_position ()

	Relative_position (const int pos, const bool re_start)

int	operator() (sequence_interval const &si) const

Private Member Functions
	Relative_position (const bool, const int)

Friends
template<class ChT , class Tr >
std::basic_ostream< ChT, Tr > &	operator<< (std::basic_ostream< ChT, Tr > &os, Relative_position const &rp)

Detailed Description

Sequence position defined relatively to an interval.

Constructor & Destructor Documentation

vdj_pipe::match::Relative_position::Relative_position	(	const bool	,
		const int
	)

private

vdj_pipe::match::Relative_position::Relative_position ( )

inline

vdj_pipe::match::Relative_position::Relative_position	(	const int	pos,
		const bool	re_start
	)

inline

Parameters

pos	position relative to an edge of a reference interval
re_start	true if the position is relative to reference interval start or false if the position is relative to reference interval end

int vdj_pipe::match::Relative_position::operator() ( sequence_interval const & si ) const

inline

template<class ChT , class Tr >

std::basic_ostream<ChT,Tr>& operator<<	(	std::basic_ostream< ChT, Tr > &	os,
		Relative_position const &	rp
	)

friend

int vdj_pipe::match::Relative_position::pos_

private

bool vdj_pipe::match::Relative_position::re_start_

private

The documentation for this class was generated from the following file: