vdj_pipe
pipeline for processing DNA sequence data
Classes | Namespaces
find_shared_impl.hpp File Reference
#include <algorithm>
#include <functional>
#include <ostream>
#include <string>
#include <vector>
#include "boost/algorithm/string/classification.hpp"
#include "boost/algorithm/string/predicate.hpp"
#include "boost/assert.hpp"
#include "boost/container/flat_map.hpp"
#include "boost/foreach.hpp"
#include "boost/multi_index_container.hpp"
#include "boost/multi_index/hashed_index.hpp"
#include "boost/multi_index/member.hpp"
#include "boost/multi_index/ordered_index.hpp"
#include "boost/range.hpp"
#include "vdj_pipe/detail/identity_predicate.hpp"
#include "vdj_pipe/exception.hpp"
#include "vdj_pipe/file_stream.hpp"
#include "vdj_pipe/gdst_search.hpp"
#include "vdj_pipe/min_match_length.hpp"
#include "vdj_pipe/object_ids.hpp"
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Classes

struct  vdj_pipe::Read_ginfo
 Read ID and group ID. More...
 
class  vdj_pipe::Group_count
 
class  vdj_pipe::Read_ginfo_store
 Read ID and group ID. More...
 
struct  vdj_pipe::Read_ginfo_store::Err
 
struct  vdj_pipe::Sequence_gstats
 
class  vdj_pipe::Group_unique
 

Namespaces

 vdj_pipe
 Main namespace of vdj_pipe library.
 

Detailed Description

part of vdj_pipe project.

Distributed under GNU General Public License, Version 3; see doc/license.txt.
Copyright Mikhail K Levin 2014