match_step_run.cpp File Reference

#include "boost/test/unit_test.hpp"
#include "test/exception_fixture.hpp"
#include "vdj_pipe/step/match_step.hpp"
#include "processing_step_utils.hpp"
#include "vdj_pipe/process_options.hpp"
#include "vdj_pipe/command_line_options.hpp"
#include "test/sample_data.hpp"

Include dependency graph for match_step_run.cpp:

Namespaces
	vdj_pipe
	Main namespace of vdj_pipe library.
	vdj_pipe::test
	Namespace for unit-tests.

Macros
#define	BOOST_TEST_MODULE   match_step_run

Functions
	vdj_pipe::test::BOOST_AUTO_TEST_CASE (match_3_elements_01)
	vdj_pipe::test::BOOST_AUTO_TEST_CASE (match_element_at_end)
	vdj_pipe::test::BOOST_AUTO_TEST_CASE (match_scan_element)
	vdj_pipe::test::BOOST_AUTO_TEST_CASE (match_step_run_02)
	vdj_pipe::test::BOOST_AUTO_TEST_CASE (match_step_run_03)

Variables
const std::string	vdj_pipe::test::match1
const std::string	vdj_pipe::test::seq1 = "taaaaaaaaaaaaaaTAGAGCccttACTCTGGGTGTCTCACCATGGCCTcc"
const std::string	vdj_pipe::test::match2
const std::string	vdj_pipe::test::seq2 = "CTGGGTGTctCACCATGGCCTcc"
const std::string	vdj_pipe::test::match3

Detailed Description

part of vdj_pipe project.

Distributed under GNU General Public License, Version 3; see doc/license.txt.
Copyright Mikhail K Levin 2014

Macro Definition Documentation

#define BOOST_TEST_MODULE   match_step_run