vdj_pipe
pipeline for processing DNA sequence data
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#include "vdj_pipe/pipe_environment.hpp"
#include <fstream>
#include <ostream>
#include "boost/chrono/chrono_io.hpp"
#include "boost/chrono/floor.hpp"
#include "boost/chrono/round.hpp"
#include "boost/filesystem/path.hpp"
#include "boost/foreach.hpp"
#include "boost/property_tree/ptree.hpp"
#include "boost/property_tree/json_parser.hpp"
#include "input_csv.hpp"
#include "keywords_root.hpp"
#include "vdj_pipe/output_stamp.hpp"
#include "vdj_pipe/pipe_paired_emid_read.hpp"
#include "vdj_pipe/pipe_paired_read.hpp"
#include "vdj_pipe/pipe_single_read.hpp"
#include "vdj_pipe/step/step_variant_store.hpp"
Namespaces | |
vdj_pipe | |
Main namespace of vdj_pipe library. | |
vdj_pipe::anonymous_namespace{pipe_environment.cpp} | |
Macros | |
#define | VDJ_PIPE_SOURCE |
Functions | |
template<class Rep , class Period > | |
std::ostream & | vdj_pipe::anonymous_namespace{pipe_environment.cpp}::print (std::ostream &os, bc::duration< Rep, Period > d) |
part of vdj_pipe project.
Distributed under GNU General Public License, Version 3; see doc/license.txt.
Copyright Mikhail K Levin 2013
#define VDJ_PIPE_SOURCE |