vdj_pipe
pipeline for processing DNA sequence data
Namespaces | Macros | Functions
pipe_environment.cpp File Reference
#include "vdj_pipe/pipe_environment.hpp"
#include <fstream>
#include <ostream>
#include "boost/chrono/chrono_io.hpp"
#include "boost/chrono/floor.hpp"
#include "boost/chrono/round.hpp"
#include "boost/filesystem/path.hpp"
#include "boost/foreach.hpp"
#include "boost/property_tree/ptree.hpp"
#include "boost/property_tree/json_parser.hpp"
#include "input_csv.hpp"
#include "keywords_root.hpp"
#include "vdj_pipe/output_stamp.hpp"
#include "vdj_pipe/pipe_paired_emid_read.hpp"
#include "vdj_pipe/pipe_paired_read.hpp"
#include "vdj_pipe/pipe_single_read.hpp"
#include "vdj_pipe/step/step_variant_store.hpp"
Include dependency graph for pipe_environment.cpp:

Namespaces

 vdj_pipe
 Main namespace of vdj_pipe library.
 
 vdj_pipe::anonymous_namespace{pipe_environment.cpp}
 

Macros

#define VDJ_PIPE_SOURCE
 

Functions

template<class Rep , class Period >
std::ostream & vdj_pipe::anonymous_namespace{pipe_environment.cpp}::print (std::ostream &os, bc::duration< Rep, Period > d)
 

Detailed Description

part of vdj_pipe project.

Distributed under GNU General Public License, Version 3; see doc/license.txt.
Copyright Mikhail K Levin 2013

Macro Definition Documentation

#define VDJ_PIPE_SOURCE