vdj_pipe::Seq_map_aligned::Match Struct Reference

#include <sequence_map_aligned.hpp>

Collaboration diagram for vdj_pipe::Seq_map_aligned::Match:

Public Member Functions
	Match ()

Public Attributes
Seq_id	id_
int	score_
unsigned	n_mismatches_
double	identity_
sequence_interval	si_
std::vector< uint32_t >	cigar_

Constructor & Destructor Documentation

vdj_pipe::Seq_map_aligned::Match::Match ( )

inline

Member Data Documentation

std::vector<uint32_t> vdj_pipe::Seq_map_aligned::Match::cigar_

Seq_id vdj_pipe::Seq_map_aligned::Match::id_

double vdj_pipe::Seq_map_aligned::Match::identity_

unsigned vdj_pipe::Seq_map_aligned::Match::n_mismatches_

int vdj_pipe::Seq_map_aligned::Match::score_

sequence_interval vdj_pipe::Seq_map_aligned::Match::si_

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The documentation for this struct was generated from the following file:

• lib/sequence_map_aligned.hpp