vdj_pipe
pipeline for processing DNA sequence data
Public Types | Public Member Functions | List of all members
vdj_pipe::Merge_paired Class Reference
Inheritance diagram for vdj_pipe::Merge_paired:
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Public Types

typedef Vm_access_paired vma_type
 
- Public Types inherited from vdj_pipe::detail::Step_base
typedef Seq_record::sequence seq_type
 
typedef Qual_record::quality qual_type
 

Public Member Functions

 Merge_paired (vma_type const &vma, boost::property_tree::ptree const &pt, Pipe_environment &pe)
 
void run ()
 
void finish ()
 
void summary (std::ostream &os) const
 
- Public Member Functions inherited from vdj_pipe::detail::Step_base
char delimiter () const
 
 Step_base (boost::property_tree::ptree const &pt, Pipe_environment const &pe)
 
void summary (std::ostream &) const
 

Additional Inherited Members

- Protected Member Functions inherited from vdj_pipe::detail::Step_base_paired
 Step_base_paired (Vm_access_paired const &vma, boost::property_tree::ptree const &pt, Pipe_environment &pe)
 
- Protected Attributes inherited from vdj_pipe::detail::Step_base_paired
Vm_access_paired vma_
 

The documentation for this class was generated from the following file: