Store sequence-related information. More...

Inheritance diagram for vdj_pipe::Read_info_store:

Collaboration diagram for vdj_pipe::Read_info_store:

Public Types
typedef name_citer_t	const_iterator

typedef info_size_index_t::const_iterator	size_iterator

typedef boost::iterator_range< size_iterator >	size_range

Public Member Functions
std::size_t	size () const

bool	empty () const

const_iterator	begin () const

const_iterator	end () const

size_range	by_size () const

size_range	by_size (const unsigned size) const

size_range	by_size_range (const unsigned from, const unsigned to=std::numeric_limits< unsigned >::max()) const

Read_info const &	operator[] (const Read_id iid) const

Read_id const *	find (const boost::string_ref id, const bool reverse) const

Read_id	insert (Read_info const &ri)

Detailed Description

Store sequence-related information.

Member Function Documentation

size_range vdj_pipe::Read_info_store::by_size ( ) const

inline

size_range vdj_pipe::Read_info_store::by_size ( const unsigned size ) const

inline

size_range vdj_pipe::Read_info_store::by_size_range	(	const unsigned	from,
		const unsigned	to = `std::numeric_limits<unsigned>::max()`
	)		const

inline

Returns: range of sequence info IDs that have % size in the range [from, to)

The documentation for this class was generated from the following file: