vdj_pipe::Command_line_options Class Reference

#include <command_line_options.hpp>

Collaboration diagram for vdj_pipe::Command_line_options:

Classes
struct	Err

Public Member Functions
	Command_line_options ()
	Command_line_options (int argc, char *argv[])
bool	is_help () const
std::string const &	help_opt () const
bool	version () const
bool	args_provided () const
std::ostream &	print_help (std::ostream &os) const
std::size_t	max_reads () const
std::size_t	max_file_reads () const
boost::property_tree::ptree	tree () const
std::vector< std::string > const &	config_files () const
void	add_config_file (std::string const &config_fn)
void	set_path_input (std::string const &in_path)
void	set_path_output (std::string const &out_path)

Static Public Member Functions
static std::ostream &	print_version (std::ostream &os)
static std::ostream &	print_info (std::ostream &os)
static std::ostream &	print_usage (std::ostream &os)

Private Member Functions
	BOOST_STATIC_CONSTANT (std::size_t, unset=static_cast< std::size_t >(-1))
void	init_options ()
boost::property_tree::ptree	options_to_tree () const

Private Attributes
boost::program_options::options_description	od_
std::string	out_path_
std::string	in_path_
std::vector< std::string >	config_fn_
std::vector< std::string >	input_csv_
std::string	help_
std::size_t	max_reads_
std::size_t	max_file_reads_
bool	version_
bool	no_stamp_
bool	args_provided_

Constructor & Destructor Documentation

vdj_pipe::Command_line_options::Command_line_options ( )

inline

vdj_pipe::Command_line_options::Command_line_options	(	int	argc,
		char *	argv[]
	)

Member Function Documentation

void vdj_pipe::Command_line_options::add_config_file ( std::string const &  config_fn )

inline

bool vdj_pipe::Command_line_options::args_provided ( ) const

inline

vdj_pipe::Command_line_options::BOOST_STATIC_CONSTANT ( std::size_t  , unset  = static_cast< std::size_t >(-1)  )

private

std::vector<std::string> const& vdj_pipe::Command_line_options::config_files ( ) const

inline

std::string const& vdj_pipe::Command_line_options::help_opt ( ) const

inline

void vdj_pipe::Command_line_options::init_options ( )

private

bool vdj_pipe::Command_line_options::is_help ( ) const

inline

std::size_t vdj_pipe::Command_line_options::max_file_reads ( ) const

inline

std::size_t vdj_pipe::Command_line_options::max_reads ( ) const

inline

bpt::ptree vdj_pipe::Command_line_options::options_to_tree ( ) const

private

std::ostream & vdj_pipe::Command_line_options::print_help

(

std::ostream &

os

)

const

std::ostream & vdj_pipe::Command_line_options::print_info ( std::ostream &  os )

static

std::ostream & vdj_pipe::Command_line_options::print_usage ( std::ostream &  os )

static

std::ostream & vdj_pipe::Command_line_options::print_version ( std::ostream &  os )

static

void vdj_pipe::Command_line_options::set_path_input ( std::string const &  in_path )

inline

void vdj_pipe::Command_line_options::set_path_output ( std::string const &  out_path )

inline

bpt::ptree vdj_pipe::Command_line_options::tree

(

)

const

bool vdj_pipe::Command_line_options::version ( ) const

inline

Member Data Documentation

bool vdj_pipe::Command_line_options::args_provided_

private

std::vector<std::string> vdj_pipe::Command_line_options::config_fn_

private

std::string vdj_pipe::Command_line_options::help_

private

std::string vdj_pipe::Command_line_options::in_path_

private

std::vector<std::string> vdj_pipe::Command_line_options::input_csv_

private

std::size_t vdj_pipe::Command_line_options::max_file_reads_

private

std::size_t vdj_pipe::Command_line_options::max_reads_

private

bool vdj_pipe::Command_line_options::no_stamp_

private

boost::program_options::options_description vdj_pipe::Command_line_options::od_

private

std::string vdj_pipe::Command_line_options::out_path_

private

bool vdj_pipe::Command_line_options::version_

private

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The documentation for this class was generated from the following files:

• include/vdj_pipe/command_line_options.hpp
• lib/command_line_options.cpp