vdj_pipe
pipeline for processing DNA sequence data
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This is the complete list of members for vdj_pipe::Match_step, including all inherited members.
delimiter() const | vdj_pipe::detail::Step_base | inline |
finish() | vdj_pipe::Match_step | |
Match_step(Vm_access_single const &vma, boost::property_tree::ptree const &pt, Pipe_environment &pe) | vdj_pipe::Match_step | |
mb_ | vdj_pipe::Match_step | private |
me_battery_ptr typedef | vdj_pipe::Match_step | private |
qual_type typedef | vdj_pipe::detail::Step_base | |
reset_access(Value_ids_single const &ids) | vdj_pipe::detail::Step_base_single | inline |
reverse_ | vdj_pipe::Match_step | private |
run() | vdj_pipe::Match_step | |
seq_type typedef | vdj_pipe::detail::Step_base | |
Step_base(boost::property_tree::ptree const &pt, Pipe_environment const &pe) | vdj_pipe::detail::Step_base | |
Step_base_single(vma_type const &vma, boost::property_tree::ptree const &pt, Pipe_environment const &pe) | vdj_pipe::detail::Step_base_single | inlineprotected |
summary(std::ostream &os) const | vdj_pipe::Match_step | |
trim_ | vdj_pipe::Match_step | private |
vma_ | vdj_pipe::detail::Step_base_single | protected |
vma_type typedef | vdj_pipe::detail::Step_base_single |