vdj_pipe
pipeline for processing DNA sequence data
Main Page
Related Pages
Namespaces
Classes
Files
Class List
Class Index
Class Hierarchy
Class Members
vdj_pipe
Parser_fasta
vdj_pipe::Parser_fasta Member List
This is the complete list of members for
vdj_pipe::Parser_fasta
, including all inherited members.
check
() const
vdj_pipe::detail::Parser_line
inline
protected
fis_
vdj_pipe::detail::Parser_line
protected
get_defstr
()
vdj_pipe::Parser_fasta
inline
vdj_pipe::detail::Parser_line::get_defstr
(const char tag)
vdj_pipe::detail::Parser_line
inline
protected
get_id
()
vdj_pipe::Parser_fasta
inline
vdj_pipe::detail::Parser_line::get_id
(const char tag)
vdj_pipe::detail::Parser_line
inline
protected
get_record
()
vdj_pipe::Parser_fasta
inline
get_sequence
()
vdj_pipe::Parser_fasta
inline
vdj_pipe::detail::Parser_line::get_sequence
(const char tag)
vdj_pipe::detail::Parser_line
inline
protected
has_next
() const
vdj_pipe::detail::Parser_line
inline
line_
vdj_pipe::detail::Parser_line
protected
line_num
() const
vdj_pipe::detail::Parser_line
inline
next_record
()
vdj_pipe::Parser_fasta
inline
Parser_fasta
(File_input const &fi)
vdj_pipe::Parser_fasta
inline
explicit
Parser_fasta
(std::istream &is, const compression::Compression compr=compression::none)
vdj_pipe::Parser_fasta
inline
explicit
Parser_line
(File_input const &fi)
vdj_pipe::detail::Parser_line
inline
explicit
protected
Parser_line
(std::istream &is, const compression::Compression compr)
vdj_pipe::detail::Parser_line
inline
explicit
protected
record
typedef
vdj_pipe::Parser_fasta
seek_line
(const char tag)
vdj_pipe::detail::Parser_line
inline
protected
sequence
typedef
vdj_pipe::Parser_fasta
set_meta
(Seq_meta &sm, const char tag)
vdj_pipe::detail::Parser_line
inline
protected
skip_line
()
vdj_pipe::detail::Parser_line
inline
protected
str_
vdj_pipe::detail::Parser_line
protected
Generated by
1.8.11