vdj_pipe::Value_ids_paired Class Reference

Provides access to standard values for paired read pipeline. More...

#include <value_names.hpp>

Public Member Functions
	Value_ids_paired (Value_map &vm)
Val_id	description_fwd () const
Val_id	description_rev () const
Val_id	sequence_fwd () const
Val_id	sequence_rev () const
Val_id	quality_fwd () const
Val_id	quality_rev () const
Val_id	interval_fwd () const
Val_id	interval_rev () const
Val_id	sequence_path_fwd () const
Val_id	sequence_path_rev () const
Val_id	quality_path_fwd () const
Val_id	quality_path_rev () const

Private Types
enum	{   descr_fwd = 0, descr_rev = 1, seq_fwd = 2, seq_rev = 3,   qual_fwd = 4, qual_rev = 5, trim_fwd = 6, trim_rev = 7,   seq_path_fwd = 8, seq_path_rev = 9, qual_path_fwd = 10, qual_path_rev = 11 }
typedef boost::array< Val_id, 12 >	id_array

Private Attributes
id_array	ida_

Detailed Description

Provides access to standard values for paired read pipeline.

Member Typedef Documentation

typedef boost::array<Val_id, 12> vdj_pipe::Value_ids_paired::id_array

private

Member Enumeration Documentation

anonymous enum

private

Enumerator
descr_fwd
descr_rev
seq_fwd
seq_rev
qual_fwd
qual_rev
trim_fwd
trim_rev
seq_path_fwd
seq_path_rev
qual_path_fwd
qual_path_rev

Constructor & Destructor Documentation

vdj_pipe::Value_ids_paired::Value_ids_paired ( Value_map &  vm )

explicit

Member Function Documentation

Val_id vdj_pipe::Value_ids_paired::description_fwd ( ) const

inline

Val_id vdj_pipe::Value_ids_paired::description_rev ( ) const

inline

Val_id vdj_pipe::Value_ids_paired::interval_fwd ( ) const

inline

Val_id vdj_pipe::Value_ids_paired::interval_rev ( ) const

inline

Val_id vdj_pipe::Value_ids_paired::quality_fwd ( ) const

inline

Val_id vdj_pipe::Value_ids_paired::quality_path_fwd ( ) const

inline

Val_id vdj_pipe::Value_ids_paired::quality_path_rev ( ) const

inline

Val_id vdj_pipe::Value_ids_paired::quality_rev ( ) const

inline

Val_id vdj_pipe::Value_ids_paired::sequence_fwd ( ) const

inline

Val_id vdj_pipe::Value_ids_paired::sequence_path_fwd ( ) const

inline

Val_id vdj_pipe::Value_ids_paired::sequence_path_rev ( ) const

inline

Val_id vdj_pipe::Value_ids_paired::sequence_rev ( ) const

inline

Member Data Documentation

id_array vdj_pipe::Value_ids_paired::ida_

private

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The documentation for this class was generated from the following files:

• include/vdj_pipe/value_names.hpp
• lib/value_names.cpp