sequence_merge_run.cpp File Reference

#include "boost/test/unit_test.hpp"
#include "test/exception_fixture.hpp"
#include "test/sample_data.hpp"
#include "external/ssw_cpp.h"
#include <iostream>
#include "vdj_pipe/sequence_merge.hpp"
#include "vdj_pipe/parser_fastq.hpp"
#include "vdj_pipe/sequence_transform.hpp"
#include "vdj_pipe/sequence_file.hpp"

Include dependency graph for sequence_merge_run.cpp:

Namespaces
	vdj_pipe
	Main namespace of vdj_pipe library.
	vdj_pipe::test
	Namespace for unit-tests.

Macros
#define	BOOST_TEST_MODULE   sequence_merge_run

Functions
	vdj_pipe::test::BOOST_AUTO_TEST_CASE (case01)
	vdj_pipe::test::BOOST_AUTO_TEST_CASE (case02)
	vdj_pipe::test::BOOST_AUTO_TEST_CASE (case03)
	vdj_pipe::test::BOOST_AUTO_TEST_CASE (case04)
	vdj_pipe::test::BOOST_AUTO_TEST_CASE (case05)

Variables
const std::string	vdj_pipe::test::s5
const std::string	vdj_pipe::test::s6 = "CCGTTTA"
const std::string	vdj_pipe::test::s7
const std::string	vdj_pipe::test::s8
const std::string	vdj_pipe::test::s10 = s5 + s6 + "T" + s7
const std::string	vdj_pipe::test::s11 = s6 + "C" + s7 + s8

Detailed Description

part of vdj_pipe project.

Distributed under GNU General Public License, Version 3; see doc/license.txt.
Copyright Mikhail K Levin 2013

Macro Definition Documentation

#define BOOST_TEST_MODULE   sequence_merge_run