Inheritance diagram for vdj_pipe::detail::Window_filter_base:

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Collaboration diagram for vdj_pipe::detail::Window_filter_base:

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Public Member Functions
void	summary (std::ostream &os) const

Public Member Functions inherited from vdj_pipe::detail::Filter_base
void	summary (std::ostream &os) const

Public Member Functions inherited from vdj_pipe::detail::Step_base_single
void	reset_access (Value_ids_single const &ids)

Public Member Functions inherited from vdj_pipe::detail::Step_base
char	delimiter () const

	Step_base (boost::property_tree::ptree const &pt, Pipe_environment const &pe)

void	summary (std::ostream &) const

Protected Member Functions
	Window_filter_base (vma_type const &vma, boost::property_tree::ptree const &pt, Pipe_environment &pe)

void	trim (sequence_interval const &si)

Protected Member Functions inherited from vdj_pipe::detail::Filter_base
	VDJ_PIPE_KEYWORD_STRUCT (kwds,(passed_name))

	Filter_base (vma_type const &vma, boost::property_tree::ptree const &pt, Pipe_environment &pe)

void	pass (const bool b)

Protected Member Functions inherited from vdj_pipe::detail::Step_base_single
	Step_base_single (vma_type const &vma, boost::property_tree::ptree const &pt, Pipe_environment const &pe)

Protected Attributes
std::size_t	nt_

Protected Attributes inherited from vdj_pipe::detail::Filter_base
std::size_t	nf_

Val_id	pass_id_

Protected Attributes inherited from vdj_pipe::detail::Step_base_single
Vm_access_single	vma_

Additional Inherited Members
Public Types inherited from vdj_pipe::detail::Step_base_single
typedef Vm_access_single	vma_type

Public Types inherited from vdj_pipe::detail::Step_base
typedef Seq_record::sequence	seq_type

typedef Qual_record::quality	qual_type

Constructor & Destructor Documentation

vdj_pipe::detail::Window_filter_base::Window_filter_base	(	vma_type const &	vma,
		boost::property_tree::ptree const &	pt,
		Pipe_environment &	pe
	)

inlineprotected

Member Function Documentation

void vdj_pipe::detail::Window_filter_base::summary ( std::ostream & os ) const

void vdj_pipe::detail::Window_filter_base::trim ( sequence_interval const & si )

inlineprotected

std::size_t vdj_pipe::detail::Window_filter_base::nt_

protected

The documentation for this class was generated from the following files: