vdj_pipe
pipeline for processing DNA sequence data
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- b -
BOOST_SYMBOL_EXPORT :
config.hpp
BOOST_SYMBOL_IMPORT :
config.hpp
BOOST_TEST_MODULE :
file_map_run.cpp
,
match_step_run.cpp
,
file_run.cpp
,
vector_set_test.cpp
,
me_relative_interval.cpp
,
id_bimap_run.cpp
,
parser_qual_run.cpp
,
gene_seq_map_run.cpp
,
pipe_environment_run.cpp
,
interval_iter_run.cpp
,
short_seq_map_run.cpp
,
value_names_run.cpp
,
value_variant_run.cpp
,
find_intersection_run.cpp
,
suffix_tree_run.cpp
,
value_map_run.cpp
,
print_sequence_run.cpp
,
sequence_transform_run.cpp
,
parser_fasta_run.cpp
,
sequence_merge_run.cpp
,
sanitize_string_run.cpp
,
file_ostream_queue_run.cpp
,
object_id_run.cpp
,
parser_fastq_run.cpp
,
path_decompose_run.cpp
,
execute_options_run.cpp
,
lib_info_run.cpp
,
nucleotide_index_run.cpp
,
find_interval_run.cpp
,
sequence_run.cpp
,
read_info_store_run.cpp
,
file_ostream_variant_run.cpp
,
match_element_run.cpp
,
sequence_store_run.cpp
- v -
VDJ_PIPE_BUILD :
lib_info.cpp
VDJ_PIPE_COMPARISON_OPERATOR_MEMBERS :
comparison_operators_macro.hpp
VDJ_PIPE_COPYRIGHT :
lib_info.cpp
VDJ_PIPE_DECL :
config.hpp
VDJ_PIPE_DESCRIPTION :
lib_info.cpp
VDJ_PIPE_KEYWORD_STRUCT :
keyword_struct_macro.hpp
VDJ_PIPE_KEYWORD_STRUCT_MACRO_ :
keyword_struct_macro.hpp
VDJ_PIPE_LICENSE :
lib_info.cpp
VDJ_PIPE_N_NUCLEOTIDES :
nucleotide_index.hpp
VDJ_PIPE_NAME :
lib_info.cpp
VDJ_PIPE_OBJECT_ID :
object_id_base.hpp
VDJ_PIPE_SOURCE :
step_factory_paired.cpp
,
merge_paired_reads_step.cpp
,
filter_base.cpp
,
write_sequence_step.cpp
,
me_factory.cpp
,
quality_stats_step.cpp
,
output_stamp.cpp
,
step_factory_paired_emid.cpp
,
input_manager.cpp
,
depth_first_iterator.cpp
,
value_names.cpp
,
apply_to_adaptor.cpp
,
match_step.cpp
,
pipe_paired_read.cpp
,
composition_stats_step.cpp
,
output_manager.cpp
,
variable_path.cpp
,
value_variant.cpp
,
file_ostream_variant.cpp
,
command_line_options.cpp
,
sanitize_string.cpp
,
process_options.cpp
,
file_properties.cpp
,
file.cpp
,
external_mid_inline.cpp
,
pipe_single_read.cpp
,
pattern_iterator.cpp
,
sequence_merge.cpp
,
find_shared.cpp
,
histogram_step.cpp
,
pipe_paired_emid_read.cpp
,
step_factory_single.cpp
,
gdst.cpp
,
ssw_cpp.cpp
,
lib_info.cpp
,
filter_step.cpp
,
write_value_step.cpp
,
external_mid_base.cpp
,
print_gdst.cpp
,
sequence_file_entry.cpp
,
external_mid_infile.cpp
,
file_ostream_queue.cpp
,
step_base.cpp
,
pipe_environment.cpp
,
file_stream.cpp
VDJ_PIPE_STATIC_STRING_METHOD :
keyword_struct_macro.hpp
VDJ_PIPE_VERSION_1 :
lib_info.cpp
VDJ_PIPE_VERSION_2 :
lib_info.cpp
VDJ_PIPE_VERSION_3 :
lib_info.cpp
VDJ_PIPE_VERSION_DIRTY :
lib_info.cpp
VDJ_PIPE_VERSION_EXTRA :
lib_info.cpp
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