vdj_pipe
pipeline for processing DNA sequence data
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edge_char() :
vdj_pipe::gdst::Pattern_iter
edge_length() :
vdj_pipe::gdst::Gdst
,
vdj_pipe::gdst::Ukkonen_inserter
Element_proto() :
vdj_pipe::match::Element_proto
emid_fwd() :
vdj_pipe::Value_ids_emid
,
vdj_pipe::Vm_access_paired_emid
emid_path_fwd() :
vdj_pipe::Value_ids_emid
,
vdj_pipe::Vm_access_paired_emid
emid_path_rev() :
vdj_pipe::Value_ids_emid
,
vdj_pipe::Vm_access_paired_emid
emid_rev() :
vdj_pipe::Value_ids_emid
,
vdj_pipe::Vm_access_paired_emid
empty() :
vdj_pipe::detail::Id_bimap< Id, Obj >
,
vdj_pipe::detail::Id_map< Id, Obj, Stor >
,
vdj_pipe::detail::Vector_set< T, Alloc >
,
vdj_pipe::Input_manager
,
vdj_pipe::Read_info
,
vdj_pipe::Read_info_store
,
vdj_pipe::Seq_entry
,
vdj_pipe::Seq_file_map
,
vdj_pipe::Seq_store
,
vdj_pipe::Variable_path
empty_lower() :
vdj_pipe::detail::Interval_checking_policy< int >
empty_upper() :
vdj_pipe::detail::Interval_checking_policy< int >
end() :
vdj_pipe::detail::Id_bimap< Id, Obj >
,
vdj_pipe::detail::Id_map< Id, Obj, Stor >
,
vdj_pipe::detail::Named_value_map< Id, Val >
,
vdj_pipe::detail::Vector_set< T, Alloc >
,
vdj_pipe::Input_manager
,
vdj_pipe::Read_info_store
,
vdj_pipe::Seq_file_entry
,
vdj_pipe::Seq_file_map
,
vdj_pipe::Seq_map_aligned
,
vdj_pipe::Seq_map_full
,
vdj_pipe::Seq_map_short
,
vdj_pipe::Seq_store
,
vdj_pipe::Step_registry
,
vdj_pipe::Value_map
ensure() :
vdj_pipe::Value_ids_single
equal() :
vdj_pipe::Id_iterator< Id >
Equal_id() :
vdj_pipe::detail::Id_bimap< Id, Obj >::Equal_id
Equal_obj() :
vdj_pipe::detail::Id_bimap< Id, Obj >::Equal_obj< ObjCompat >
erase() :
vdj_pipe::detail::Id_bimap< Id, Obj >
,
vdj_pipe::detail::Id_map< Id, Obj, Stor >
,
vdj_pipe::detail::Vector_set< T, Alloc >
,
vdj_pipe::Seq_file_map
Escape() :
vdj_pipe::anonymous_namespace{sanitize_string.cpp}::Escape< Iter >
Exception_fixture() :
vdj_pipe::test::Exception_fixture
External_mid_infile() :
vdj_pipe::External_mid_infile
External_mid_inline() :
vdj_pipe::External_mid_inline
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