- c -

• categories() : vdj_pipe::Step_registry
• category() : vdj_pipe::step::Maker< Step > , vdj_pipe::Step_registry
• check() : vdj_pipe::detail::Parser_line , vdj_pipe::gdst::Match , vdj_pipe::Pipe_paired_read , vdj_pipe::Pipe_single_read , vdj_pipe::Seq_file_entry , vdj_pipe::Seq_map_aligned
• check_dir() : vdj_pipe::Input_manager
• check_duplicates() : vdj_pipe::Group_unique
• check_edge() : vdj_pipe::gdst::Gdst
• check_range() : vdj_pipe::detail::Id_map< Id, Obj, Stor >
• check_state() : vdj_pipe::gdst::Pattern_iter
• child() : vdj_pipe::gdst::Gdst
• Children() : vdj_pipe::gdst::Children
• clear() : vdj_pipe::detail::Id_bimap< Id, Obj > , vdj_pipe::detail::Id_map< Id, Obj, Stor > , vdj_pipe::detail::Vector_set< T, Alloc > , vdj_pipe::Seq_file_map
• clear_values() : vdj_pipe::detail::Named_value_map< Id, Val > , vdj_pipe::Value_map
• collect_sequences() : vdj_pipe::gdst::Gdst
• combine() : vdj_pipe::Best_match_pair< ID, Score > , vdj_pipe::Read_info
• Command_line_options() : vdj_pipe::Command_line_options
• comment() : vdj_pipe::step::Maker< Step >
• Common_subseq() : vdj_pipe::gdst::Common_subseq
• compiler() : vdj_pipe::Lib_info
• Composition_stats() : vdj_pipe::Composition_stats
• compression() : vdj_pipe::File
• config_files() : vdj_pipe::Command_line_options
• copy() : vdj_pipe::detail::Id_bimap< Id, Obj >
• copy_count() : vdj_pipe::Group_count
• copyright() : vdj_pipe::Lib_info
• create() : vdj_pipe::Value_ids_single
• current() : vdj_pipe::gdst::Pattern_iter
• Cut_proto() : vdj_pipe::match::Cut_proto